ndexr - NDEx R client library
This package offers an interface to NDEx servers, e.g. the public server at http://ndexbio.org/. It can retrieve and save networks via the API. Networks are offered as RCX object and as igraph representation.
Last updated 4 months ago
pathwaysdataimportnetwork
9 stars 1.69 score 34 dependenciesRCX - R package implementing the Cytoscape Exchange (CX) format
Create, handle, validate, visualize and convert networks in the Cytoscape exchange (CX) format to standard data types and objects. The package also provides conversion to and from objects of iGraph and graphNEL. The CX format is also used by the NDEx platform, a online commons for biological networks, and the network visualization software Cytocape.
Last updated 4 months ago
pathwaysdataimportnetwork
8 stars 1.45 score 14 dependencies 1 dependents